enhancer

cd /Bioinformatics/Users/zfu/2015_Bethany_SuperEnhancer/08.PeakCalling.TypicalOnly/W500D750E3L4
find . -type f -name "*.err" -exec rm {} \;
find . -type f -name "*.out" -exec rm {} \;
find . -type f -name "*.bw" -exec rm {} \;
find . -type f -name "*.bed" -exec rm {} \;
find . -type f -name "*.bedGraph" -exec rm {} \;
find . -type f -name "typicalPeaks.txt" -exec rm {} \;
find . -type f -name "*.sh" -exec sed -i "s/W200D750E3L4/W500D750E3L4/g" {} \;
find . -type f -name "*.sh" -exec sed -i "s/200/500/g" {} \;
find . -type f -name "*ChIPSeq.sh" -exec qsub {} \;


cd /Bioinformatics/Users/zfu/2015_Bethany_SuperEnhancer/08.PeakCalling.TypicalOnly/W750D750E3L4
find . -type f -name "*.err" -exec rm {} \;
find . -type f -name "*.out" -exec rm {} \;
find . -type f -name "*.bw" -exec rm {} \;
find . -type f -name "*.bed" -exec rm {} \;
find . -type f -name "*.bedGraph" -exec rm {} \;
find . -type f -name "typicalPeaks.txt" -exec rm {} \;
find . -type f -name "*.sh" -exec sed -i "s/W200D750E3L4/W750D750E3L4/g" {} \;
find . -type f -name "*.sh" -exec sed -i "s/200/750/g" {} \;
find . -type f -name "*ChIPSeq.sh" -exec qsub {} \;


cd /Bioinformatics/Users/zfu/2015_Bethany_SuperEnhancer/08.PeakCalling.TypicalOnly/W1000D750E3L4
find . -type f -name "*.err" -exec rm {} \;
find . -type f -name "*.out" -exec rm {} \;
find . -type f -name "*.bw" -exec rm {} \;
find . -type f -name "*.bed" -exec rm {} \;
find . -type f -name "*.bedGraph" -exec rm {} \;
find . -type f -name "typicalPeaks.txt" -exec rm {} \;
find . -type f -name "*.sh" -exec sed -i "s/W200D750E3L4/W1000D750E3L4/g" {} \;
find . -type f -name "*.sh" -exec sed -i "s/200/1000/g" {} \;
find . -type f -name "*ChIPSeq.sh" -exec qsub {} \;



cd /Bioinformatics/Users/zfu/2015_Bethany_SuperEnhancer/08.PeakCalling.TypicalOnly/W500D750E3L4
find . -type f -name "*_bw.sh" -exec qsub {} \;
cd /Bioinformatics/Users/zfu/2015_Bethany_SuperEnhancer/08.PeakCalling.TypicalOnly/W750D750E3L4
find . -type f -name "*_bw.sh" -exec qsub {} \;
cd /Bioinformatics/Users/zfu/2015_Bethany_SuperEnhancer/08.PeakCalling.TypicalOnly/W1000D750E3L4
find . -type f -name "*_bw.sh" -exec qsub {} \;




cd /Bioinformatics/Users/zfu/2015_Bethany_SuperEnhancer/08.PeakCalling.TypicalOnly/W500D750E3L4
find . -type f -name "reports.html" -exec sed -i "s/W200D750E3L4/W500D750E3L4/g" {} \;
find . -type f -name "typicalPeaks.txt" -exec sed -i "s/W200D750E3L4/W500D750E3L4/g" {} \;

cd /Bioinformatics/Users/zfu/2015_Bethany_SuperEnhancer/08.PeakCalling.TypicalOnly/W750D750E3L4
find . -type f -name "reports.html" -exec sed -i "s/W200D750E3L4/W750D750E3L4/g" {} \;
find . -type f -name "typicalPeaks.txt" -exec sed -i "s/W200D750E3L4/W750D750E3L4/g" {} \;


cd /Bioinformatics/Users/zfu/2015_Bethany_SuperEnhancer/08.PeakCalling.TypicalOnly/W1000D750E3L4
find . -type f -name "reports.html" -exec sed -i "s/W200D750E3L4/W1000D750E3L4/g" {} \;
find . -type f -name "typicalPeaks.txt" -exec sed -i "s/W200D750E3L4/W1000D750E3L4/g" {} \;

change log file

331  find . -type f -name "*.sh"
  339  find . -type f -name "*.sh"
  340  find . -type f -name "*.sh" -exec sed -i "/08.PeakCalling.TypicalOnly/08.PeakCalling.TypicalOnly\/Enrichment3/g" {} \;
  341  find . -type f -name "*.sh" -exec sed -i "/TypicalOnly/TypicalOnly\/Enrichment3/g" {} \;
  342  find . -type f -name "*.sh" -exec sed -i "/ypicalOnly/ypicalOnly\/Enrichment3/g" {} \;
  343  find . -type f -name "*.sh" -exec sed -i "s/ypicalOnly/ypicalOnly\/Enrichment3/g" {} \;
  344  find . -type f -name "*.sh" | cat
  345  find . -type f -name "*.sh" -exec head {} \;
  346  find . -type f -name "*.sh"
  373  find . -type f -name "typicalPeaks_bw.sh"
  398  find . -type f -name "*Seq.sh"
  408  find . -type f -name "*.sh"
  409  find . -type f -name "*.sh" | grep W100D100W2
  410  find . -type f -name "*.sh" | cat | grep W100D100W2
  411  find . -type f -name "*.sh" -exex cat {} | grep W100D100W2
  412  find . -type f -name "*.sh" -exec cat {} | grep W100D100W2
  413  find . -type f -name "*.sh" -exec cat {} \;| grep W100D100W2
  414  find . -type f -name "*.sh" -exec cat {} \;
  415  find . -type f -name "*.sh" -exec sed -i "s/W100D100E2/W100D100E3/g" {} \;
  416  find . -type f -name "*.sh" -exec cat {} \;
  424  find . -type f -name "*bw.sh"
  598  find . -type f -name "*_bw.sh" -exec qsub {} \;
  600  find . -type f -name "*_bw.sh" -exec cat {} \;
  612  find . -type f -name "_bw.sh"
  613  find . -type f -name "*_bw.sh"
  614  find . -type f -name "*_bw.sh" -exec qsub {} \;
  619  find . -type f -name "*_bw.sh" -exec qsub {} \;
  766  find . -type f -name "*.sh" -exec sed -i "s/W200D750E3L4/W200D1500E3L4/g" {} \;
  767  find . -type f -name "*.sh" -exec sed -i "s/750/1500/g" {} \;
  773  find . -type f -name "*.sh" -exec sed -i "s/W200D750E3L4/W200D2500E3L4/g" {} \;
  774  find . -type f -name "*.sh" -exec sed -i "s/750/2500/g" {} \;
  788  find . -type f -name "t*.sh"
  789  find . -type f -name "t*.sh" -exec qsub {} \;
  792  find . -type f -name "t*.sh" -exec qsub {} \;
  824  find . -type f -name "*.sh"