2014-04-18
7.0.1
Class I + DRB1
Search for allele which has one read cover the entire exon for each exon (2, 3,4)
Class II
Search for allele has coverage on each base at exon 2 + exon 3
7.0.2
Exclude 10 bases from exon-intron boundary and find the minimum coverage
7.0.3
find the minimum coverage from the exon-intron boundary
Search for allele which has one read cover the entire exon for each exon (2, 3,4) , if its number < 2, then search alleles have coverage on each base at exon 2 + exon 3 + exon 4
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